BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027A05LP1|AL428646
(928 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1333 650 0.0
3x_Contig1770 458 e-129
>3x_Contig1333
Length = 6390
Score = 650 bits (328), Expect = 0.0
Identities = 328/328 (100%)
Strand = Plus / Minus
Query: 601 acttatgtactactgcttcgtaggtattctaggacaacaacgcttcttgagttctctcgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6385 acttatgtactactgcttcgtaggtattctaggacaacaacgcttcttgagttctctcgt 6326
Query: 661 tgtttgttcacgtctcttcatatacctcattgccaaagaaaaagaaataaagctttgatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6325 tgtttgttcacgtctcttcatatacctcattgccaaagaaaaagaaataaagctttgatt 6266
Query: 721 cgagctgaaaagaatcttctatgagatgagatgagatgaggtacagctgaataggttggt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6265 cgagctgaaaagaatcttctatgagatgagatgagatgaggtacagctgaataggttggt 6206
Query: 781 aacaggacaatagctggcctggatacaaagactgtgcagtaaaccatattccacattgat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6205 aacaggacaatagctggcctggatacaaagactgtgcagtaaaccatattccacattgat 6146
Query: 841 aatatgagcggtaaatctaaacgtcctagacaaagacacgattcgtcgttgcagttggcc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6145 aatatgagcggtaaatctaaacgtcctagacaaagacacgattcgtcgttgcagttggcc 6086
Query: 901 agtgtcattggtgctggagcgaataaga 928
||||||||||||||||||||||||||||
Sbjct: 6085 agtgtcattggtgctggagcgaataaga 6058
>3x_Contig1770
Length = 29267
Score = 458 bits (231), Expect = e-129
Identities = 243/246 (98%), Gaps = 2/246 (0%)
Strand = Plus / Minus
Query: 1 gatccgacttggtcgcagcagctagaaacgccacagtacgggtttagggtcaggcccggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gatccgacttggtcgcagcagctagaaacgccacagtacgggtttagggtcaggcccggg 187
Query: 61 ttccaggcgtatactggtggtgttgcaggcaatgggaacgaccatcatgggtacccatcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttccaggcgtatactggtggtgttgcaggcaatgggaacgaccatcatgggtacccatcg 127
Query: 121 aacttgaatatgaatacgaatacgacgaattcgtaccagcaacaaggtgtgtatcaggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 aacttgaatatgaatacgaatacgacgaattcgtaccagcaacaaggtgtgtatcaggca 67
Query: 181 c--ccgtttctgatgcgaataaggaacagaagacgaagaaaaagagagggtttttcggca 238
| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ccacagtttctgatgcgaataaggaacagaagacgaagaaaaagagagggtttttcggca 7
Query: 239 ggaaga 244
||||||
Sbjct: 6 ggaaga 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8936
Number of Sequences: 1807
Number of extensions: 8936
Number of successful extensions: 658
Number of sequences better than 1.0e-20: 2
length of query: 928
length of database: 10,358,551
effective HSP length: 16
effective length of query: 912
effective length of database: 10,329,639
effective search space: 9420630768
effective search space used: 9420630768
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)